Optimizing Workflows in Protein Production Laboratories
Decreasing Delivery Times of High-Quality Proteins to Support Research
1/19/2023 - January 20, 2023 ALL TIMES PST
Protein production is so much more than the act of expressing the protein itself. During Cambridge Healthtech Institute's Inaugural Optimizing Workflows in Protein Production Laboratories conference, we take a step back to gain a broad view of the end-to-end protein production workflow to uncover strategies to reduce cycle time. Topics will include assessing your throughput needs, incorporation of automation to increase throughput, and critically evaluating your protein production process to address bottlenecks and increase efficiency.

Thursday, January 19

Registration and Morning Coffee (Indigo and Aqua Foyer)

ROOM LOCATION: Aqua Salon AB

MANAGING AND MEETING YOUR CUSTOMER'S NEEDS

Chairperson's Opening Remarks

Mary Ann Brown, Executive Director, Conferences, Cambridge Healthtech Institute , Executive Director , Conferences , Cambridge Healthtech Institute

Challenges and Opportunities Supporting Early-Stage Drug Discovery Projects

Photo of Oleg Brodsky, MBA, Senior Principal Scientist, Structural Biology & Protein Sciences, Pfizer Inc. , Sr Principal Scientist , Structural Biology & Protein Sciences , Pfizer Inc
Oleg Brodsky, MBA, Senior Principal Scientist, Structural Biology & Protein Sciences, Pfizer Inc. , Sr Principal Scientist , Structural Biology & Protein Sciences , Pfizer Inc

Protein targets for small molecule drug discovery efforts are becoming increasingly more challenging. In addition, novel lead ID approaches and modalities are being utilized in order to address these challenges. Flexible and agile protein production workflows must be deployed in order to meet these project demands, as will be highlighted in this presentation.

Making Proteins for Geneticists: Life in a Small Protein Facility

Photo of Ruth L. Saxl, PhD, Senior Manager, Protein Sciences, Scientific Services, Jackson Laboratory , Senior Manager , Scientific Services , The Jackson Laboratory
Ruth L. Saxl, PhD, Senior Manager, Protein Sciences, Scientific Services, Jackson Laboratory , Senior Manager , Scientific Services , The Jackson Laboratory

The Jackson Laboratory pioneered the use of mice as models for human disease. Today, it discovers precise genomic solutions for human diseases. JAX Protein Production and Purification Service enables the faculty to advance newly identified genes to the proteins they encode. While producing proteins, the service focuses on educating the geneticists about proteins. It strives to provide high-quality services while understanding the limits determined by being a small service. 

Managing Eukaryotic Expression Platform (EEP) at the Structural Genomics Consortium

Photo of Almagul Seitova, PhD, Senior Research Associate, Structural Genomic Consortium, University of Toronto , Sr Research Assoc , Structural Genomic Consortium , Univ of Toronto
Almagul Seitova, PhD, Senior Research Associate, Structural Genomic Consortium, University of Toronto , Sr Research Assoc , Structural Genomic Consortium , Univ of Toronto

The Eukaryotic Expression Platform is a core infrastructure platform at SGC, utilizing an optimized pipeline for the production of recombinant proteins that require eukaryotic expression machinery to obtain sufficient quantities of active and stable proteins suitable for functional and structural studies. This platform also permits the identification of the soluble forms of multiple constructs of proteins, including domains and truncated fragments as well as full-length proteins through small-scale expression screening.

Industrial Standards in an Academic Environment

Photo of Bjørn Voldborg, MSc, Head, National Biologics Facility, DTU Bioengineering, Technical University of Denmark , Director CHO Cell Line Development , Novo Nordisk Foundation Center for Biosustainability , Technical University of Denmark
Bjørn Voldborg, MSc, Head, National Biologics Facility, DTU Bioengineering, Technical University of Denmark , Director CHO Cell Line Development , Novo Nordisk Foundation Center for Biosustainability , Technical University of Denmark

The National Biologics Facility at the Technical University of Denmark offers service to both academic and industrial partners within protein production, protein characterization, and cell line development. The Facility offers the advantages of a flexible and dynamic cutting-edge academic environment operating at industrial standards. The challenges of prioritizing expectations, timelines and costs with academic and industrial customers, while keeping motivation and academic mindset of the staff will be discussed.

Process Optimization for Animal-free Protein Production

Photo of Luana Ferrara, PhD, R&D Manager, Qkine Ltd , R&D Manager , Qkine Ltd
Luana Ferrara, PhD, R&D Manager, Qkine Ltd , R&D Manager , Qkine Ltd

Coffee Break in the Exhibit Hall with Poster Viewing (Indigo Ballroom)

The Daft Punk Approach to Maximizing Protein Production – Faster, Better, Stronger via Leveraging Open-Source Robotics, Optimal Scaling, and High-Throughput Analytics

Photo of Lauren P. Carter, Principal Research Scientist & Engineer, Biochemistry, University of Washington , Principal Research Scientist & Engineer , Biochemistry , Univ of Washington
Lauren P. Carter, Principal Research Scientist & Engineer, Biochemistry, University of Washington , Principal Research Scientist & Engineer , Biochemistry , Univ of Washington

Panel Moderator:

PANEL DISCUSSION:
Protein Production Lab Challenges: Methodologies, Strategies, and the Art of Managing Multiple Projects

Richard Altman, MS, Field Application Scientist, Thomson Instrument Company , Field Application Scientist , Thomson Instrument Company

Panelists:

David Blum, PhD, Director, External Program Management and Bioexpression & Fermentation Facility, Biochemistry & Molecular Biology, University of Georgia , Dir External Program Management , Daedamab , Alloy Therapeutics

Oleg Brodsky, MBA, Senior Principal Scientist, Structural Biology & Protein Sciences, Pfizer Inc. , Sr Principal Scientist , Structural Biology & Protein Sciences , Pfizer Inc

Christa Cortesio, PhD, Director, Protein Biochemistry & Analytics Core, Kite, a Gilead Company , Director , Protein Science , Kite Pharma, a Gilead Co.

Dominic Esposito, PhD, Senior Director, Protein Sciences, Septerna , Senior Director, Protein Sciences , Discovery Biology , Septerna

Ruth L. Saxl, PhD, Senior Manager, Protein Sciences, Scientific Services, Jackson Laboratory , Senior Manager , Scientific Services , The Jackson Laboratory

Bjørn Voldborg, MSc, Head, National Biologics Facility, DTU Bioengineering, Technical University of Denmark , Director CHO Cell Line Development , Novo Nordisk Foundation Center for Biosustainability , Technical University of Denmark

Session Break and Transition to Luncheon Presentation

Ice Cream Break in the Exhibit Hall and Last Chance for Poster Viewing (Indigo Ballroom)

STRATEGIES FOR ENHANCING THE PRODUCTION WORKFLOW

Chairperson's Remarks

Dominic Esposito, PhD, Senior Director, Protein Sciences, Septerna , Senior Director, Protein Sciences , Discovery Biology , Septerna

Protein Production and Biochemistry Support of CAR T and Cell-Based Therapeutics 

Photo of Christa Cortesio, PhD, Director, Protein Biochemistry & Analytics Core, Kite, a Gilead Company , Director , Protein Science , Kite Pharma, a Gilead Co.
Christa Cortesio, PhD, Director, Protein Biochemistry & Analytics Core, Kite, a Gilead Company , Director , Protein Science , Kite Pharma, a Gilead Co.

Research and development of next-generation cell therapies are aimed at engineering safer, more potent, and effective therapies and broadening the range of indications they can target. This goal will be best achieved through a multidisciplinary approach that includes high-quality reagent proteins and biochemistry support to accelerate the acquisition of high-quality scientific data to understand drug attributes and mechanisms of action.

Implementing Kanban for Protein Expression

Photo of David Blum, PhD, Director, External Program Management and Bioexpression & Fermentation Facility, Biochemistry & Molecular Biology, University of Georgia , Dir External Program Management , Daedamab , Alloy Therapeutics
David Blum, PhD, Director, External Program Management and Bioexpression & Fermentation Facility, Biochemistry & Molecular Biology, University of Georgia , Dir External Program Management , Daedamab , Alloy Therapeutics

Kanban was originally developed for automobile manufacturing and is now used along with Kanban boards for project management in a variety of areas including most notably software development. Software tools are available including Trello for Kanban board management making project management across teams and locations possible. The focus of this talk will be how to employ Kanban boards to improve workflows.

The Frederick National Laboratory STAR TREC Initiative: Standardizing Methodologies for High-Quality Recombinant Protein Production

Photo of Dominic Esposito, PhD, Senior Director, Protein Sciences, Septerna , Senior Director, Protein Sciences , Discovery Biology , Septerna
Dominic Esposito, PhD, Senior Director, Protein Sciences, Septerna , Senior Director, Protein Sciences , Discovery Biology , Septerna

Generating high-quality, reproducible recombinant proteins is a significant challenge facing the protein production field. The FNL STAR TREC initiative aims to assist in standardization of protein production SOPs and quality control, with the goal of helping to improve reproducibility and minimize financial costs and time wasted in support of basic research and early-stage drug discovery efforts. We will explore ways in which STAR TREC can guide researchers to improve protein quality and ensure consistency across laboratories and experiments.

Networking Refreshment Break (Aqua Foyer)

Utilizing a Streamlined Automated Workflow to QC Baculovirus Expression

Andrea Partridge, PhD, Senior Scientist, Protein & Structural Chemistry, Merck & Co., Inc. , Sr Scientist , Protein & Structural Chemistry , Merck & Co Inc

The Baculovirus expression system is a powerful and widely used methodology to generate large quantities of recombinant protein. However, resource challenges exist with the system; these include time and effort to generate, screen, and store large numbers of viruses. We have developed a streamlined process to QC new viral constructs by incorporating; 1.) Off-the-shelf automation platforms 2.) Screening miniaturization techniques and 3.) Data management platforms. This workflow accelerates viral generation through an improved screening funnel and reduces the total number of viral samples that need to be managed thereby making handling and storage more efficient.

Think Tank: Production Workflow Think Tanks: Reducing Costs, Challenges, and Opportunities

Mary Ann Brown, Executive Director, Conferences, Cambridge Healthtech Institute , Executive Director , Conferences , Cambridge Healthtech Institute

Join a Think Tank discussion group to share and experience and hear what others have learned.
1) Workflow vs technology development?
2) Scale-up, when and how to go from research to manufacturing?
3) Doing more with less – how do you test new methods and workflows without blowing up your annual budget?
4) Keeping staff motivated and engaged?

Think Tank Report Outs: Listen and Learn

During the Think Tank interactive discussions, we shared our experiences and working solutions for end-to-end protein production workflows. Now as a collective community, let’s hear from the table facilitators as they share key discussion points, strategies, and provide a wrap-up of their table’s discussion. What can we take away and apply?  

Close of Day

Friday, January 20

Registration (Indigo Foyer)

BuzZ Sessions (Indigo and Aqua Foyer)

ROOM LOCATION: Indigo and Aqua Foyer

BuzZ Sessions

BuzZ Sessions with Continental Breakfast (IN-PERSON ONLY)

PepTalk’s BuzZ Sessions are focused, stimulating discussions in which delegates discuss important and interesting topics related to upstream protein expression and production through downstream scale-up and manufacturing. This is a moderated discussion with brainstorming and interactive problem-solving between scientists from diverse areas who share a common interest in the discussion topic.
Please continue to check the BuzZ Session page on our conference website for detailed discussion topics and moderators

BuzZ Table 5:
Common Issues with Transient Protein Production

Richard Altman, MS, Field Application Scientist, Thomson Instrument Company , Field Application Scientist , Thomson Instrument Company

Henry C. Chiou, PhD, retired Senior Director General Manager, Biosciences, Thermo Fisher Scientific , Sr Director / General Manager (retired) , Delivery and Protein Expression, Biosciences , Thermo Fisher Scientific (retired)

Dominic Esposito, PhD, Senior Director, Protein Sciences, Septerna , Senior Director, Protein Sciences , Discovery Biology , Septerna

  • What are the current challenges to transient protein production?
  • How has the COVID-19 pandemic affected your workflow and productivity?
  • How do we optimize the whole protein expression workflow process?
  • How can we maintain volumetric yields while scaling transient expression up or down?
  • What cell line(s) should we use and when?
  • What parameters can impact the quality or physical attributes of transiently produced proteins?

ROOM LOCATION: Aqua Salon AB

FLEXIBLE AND AGILE PROTEIN PURIFICATION AND CHARACTERIZATION WORKFLOWS

Chairperson's Remarks

Petra Fromme, PhD, Paul V. Galvin Professor, Chemistry & Biochemistry, Arizona State University , Paul V Galvin Prof , Chemistry & Biochemistry , Arizona State Univ

What Are the Key Considerations for Setting up and Maintaining an Effective Protein Production Laboratory?

Photo of Richard Altman, MS, Field Application Scientist, Thomson Instrument Company , Field Application Scientist , Thomson Instrument Company
Richard Altman, MS, Field Application Scientist, Thomson Instrument Company , Field Application Scientist , Thomson Instrument Company

Protein production is more complex than just the act of expressing the protein. This presentation will review the end-to-end protein production workflow process and reflect on possibilities of how to increase the efficiency and productivity of a recombinant protein expression facility.

Large-Scale Protein Expression and Purification in Hundreds of Milligram Amounts for Time-Resolved Studies with X-Ray Free Electron Lasers

Photo of Petra Fromme, PhD, Paul V. Galvin Professor, Chemistry & Biochemistry, Arizona State University , Paul V Galvin Prof , Chemistry & Biochemistry , Arizona State Univ
Petra Fromme, PhD, Paul V. Galvin Professor, Chemistry & Biochemistry, Arizona State University , Paul V Galvin Prof , Chemistry & Biochemistry , Arizona State Univ

X-ray free electron lasers probe protein structures with ultrashort x-ray pulses thereby enabling the determination of molecular movies of molecules “at work," but large quantities of proteins in the range of hundreds of milligrams are required. We will present strategies and procedures for large-scale cell culture and protein isolation for XFEL studies that include preparation of large photosynthetic membrane protein complexes, as well as preparation of proteins from SARS-CoV-2. 

Rapid Production of Highly Purified Tagless Proteins under a Simple Platform

Photo of David W. Wood, PhD, Professor, Chemical & Biomolecular Engineering, Ohio State University , Prof , Chemical & Biomolecular Engineering , Ohio State University
David W. Wood, PhD, Professor, Chemical & Biomolecular Engineering, Ohio State University , Prof , Chemical & Biomolecular Engineering , Ohio State University

High-throughput protein production relies on affinity tags to enable purification of new targets, where tags are often left in place during initial target characterization. The production of tagless targets is now possible via a self-removing tag that functions in simple buffer systems. We will describe the use of this system to purify a variety of targets to extremely high purity with a standard protocol on a universal affinity resin.

Reimagining Protein Production Workflows to Enable Next-Generation Biologics?

Photo of Daniel Yoo, Scientific Associate Director, Large Molecule Discovery, Amgen, Inc. , Associate Director, Protein Therapeutics , Large Molecule Discovery , Amgen Inc
Daniel Yoo, Scientific Associate Director, Large Molecule Discovery, Amgen, Inc. , Associate Director, Protein Therapeutics , Large Molecule Discovery , Amgen Inc

As biologic therapeutics continue to increase in complexity, innovative approaches to candidate screening, production, characterization, and development are more important than ever. Our advanced protein production workflows incorporate novel processes, intelligent high-throughput automation, and high-quality informatics to enable robust molecule screening, selection, and scale-up. These enhancements enable advances in the speed, quality, and productivity of our biologics development pipeline.

Networking Coffee Break (Aqua Foyer)

Advancements in Protein Production Workflows to Support the Ever Increasing Demand & Complexity in Drug Discovery

Photo of Kanika Bajaj Pahuja, PhD, Senior Scientific Manager, Protein Sciences, Genentech , Scientific Manager , Protein Sciences , Genentech Inc
Kanika Bajaj Pahuja, PhD, Senior Scientific Manager, Protein Sciences, Genentech , Scientific Manager , Protein Sciences , Genentech Inc

Drug Discovery landscape is ever evolving and constantly demands revolutionary advancements in protein expression and production core laboratories. This presentation will focus on the evolution of our end-to-end automated high-throughput protein expression, purification workflows, and building creative solutions to support ever-increasing demands in today's world. It will emphasize the importance of collaboration and integration between different sub-groups including molecular biology, automation, and bioinformatics to provide more efficient processes. These multi-facet approaches have significantly alleviated some of the bottlenecks in protein production and accelerates the provision of key protein reagents to ambitious projects, particularly for challenging and undruggable targets.

Think Tank: Protein Purification & Characterization – What’s Next?

Mary Ann Brown, Executive Director, Conferences, Cambridge Healthtech Institute , Executive Director , Conferences , Cambridge Healthtech Institute

Join a Think Tank discussion group to share and experience and hear what others have learned.
1) Workflow vs technology development?
2) What might address the future and what is needed?
3) Issues and challenges with end-to-end protein production?
4) Tearing down silos – how do you foster cross-functional collaborations to innovate and improve
5) Takeaways from PepTalk: The Protein Science and Production Week?

Think Tank Report Outs: Listen and Learn

During the Think Tank Table discussions, we shared our experiences and working solutions for protein purification and characterization workflows. Now as a collective community, let’s hear from the table facilitators as they share key discussion points, strategies, and provide a wrap-up of their table’s discussion. What can we take away and apply?

Close of PepTalk


For more details on the conference, please contact:

Mary Ann Brown

Executive Director, Conferences

Cambridge Healthtech Institute

Phone: +1 781-972-5497

Email: mabrown@healthtech.com

 

For sponsorship information, please contact:

 

Companies A-K

Jason Gerardi

Sr. Manager, Business Development

Cambridge Healthtech Institute

Phone: +1 781-972-5452

Email: jgerardi@healthtech.com

 

Companies L-Z

Ashley Parsons

Manager, Business Development

Cambridge Healthtech Institute

Phone: +1 781-972-1340

Email: ashleyparsons@healthtech.com