Cambridge Healthtech Institute's 2nd Annual

Creative Protein Engineering

Strategies for Engineering Complex New Modalities

January 19 - 20, 2023 ALL TIMES PST

CHI's popular Creative Protein Engineering conference offers an examination of solutions to the challenges of engineering complex new biotherapeutic modalities with dramatically improved specificities. The program will examine engineering strategies behind the next generation of ADCs and bi-/multi-specifics, and consider the progress in resolving unmet medical needs through achieving delivery to tumors, organs, tissues, and the brain. The track also builds on the information presented in the Intelligent Antibody Discovery programs by showcasing the role of informatics tools in the engineering of complex new modalities.

Thursday, January 19

Registration and Morning Coffee (Indigo and Aqua Foyer)8:00 am

Organizer's Welcome Remarks8:30 am

ROOM LOCATION: Aqua Salon C

8:35 am

Chairperson’s Opening Remarks

Yuan Cheng, PhD, Senior Principal Scientist, Therapeutic Discovery, Amgen, Inc.

8:40 am KEYNOTE PRESENTATION:

Evolvability and Developability in Synthetic Scaffolds

Benjamin J. Hackel, PhD, Professor, Chemical Engineering & Materials Science, University of Minnesota

Synthetic miniproteins are compelling scaffolds for binding ligands with advantageous modularity, physiological transport, and efficient synthesis. We have evaluated the evolvability and developability of >50 miniprotein libraries systematically varied across topology, framework, and paratope location. We evolved binders to eight targets and measured proxies of solubility, expression, and stability for millions of scaffold variants. The result elucidates biophysical factors that dictate miniprotein scaffold performance thereby empowering library and clone design.

NEXT-GENERATION CONJUGATES AND FUSIONS

9:20 am

Toll-Like Receptor Agonist Antibody Conjugate for Targeted Immune Activation

Min Li, PhD, Director, Protein Science, Tallac Therapeutics Inc

Tallac Therapeutics focuses on novel therapeutics engaging both innate and adaptive anti-tumor immunity. We developed a novel Toll-like Receptor Agonist Antibody Conjugate (TRAAC) platform to deliver a potent TLR9 agonist (T-CpG) for targeted immune activation via systemic administration. TRAAC molecules targeting either immune cell receptors or tumor-specific antigens demonstrated robust immune modulation and potent single-agent anti-tumor activity in preclinical settings, suggesting therapeutic potential across multiple solid tumor malignancies.

9:50 am Comparing Potential Bispecific Formats of Trastuzumab and a Humanized OKT3

Donmienne Leung, PhD, Head of Protein Engineering, Absolute Antibody

Not every antibody can be combined to produce well-behaved multi-specifics.  The valency and geometry of each design can determine the production, target engagement and ultimately the requisite biological functions.  In this case study, we selected two established antibody therapeutics, trastuzumab and a humanized OKT3 to produce 20 different bispecific formats to compare the feasibility of each format.

10:05 am Expression Platform for Producing Flexible and Novel Bispecific Modalities at Pandemic Speed

Sean Taylor, PhD, BD Executive, Business Development, GenScript

The expression of modified antibodies has opened the door for generation of new and powerful treatment options. The challenges associated with augmenting expression, controlling glycosylation and assuring appropriate assembly, folding and solubility of novel disease-specific antibodies have increased dramatically. We describe a novel platform to overcome the pitfalls of next generation antibody design with results demonstrating the production and purification of bispecific antibodies with native and modified glycosylation in weeks.

Coffee Break in the Exhibit Hall with Poster Viewing (Indigo Ballroom)10:20 am

11:00 am

Discovery of a Bispecific GIPR Antagonist Antibody and GLP-1 Peptide Conjugate (AMG 133) for the Treatment of Obesity

Yuan Cheng, PhD, Senior Principal Scientist, Therapeutic Discovery, Amgen, Inc.

Gastric inhibitory polypeptide receptor (GIPR) plays a role in regulation of body weight and GLP-1 receptor agonists are known to control blood glucose levels. We will present the discovery of a novel GIPR antagonistic antibody and GLP-1 peptide conjugate (AMG 133) that demonstrated robust body weight reduction and significant improvement of metabolic parameters in preclinical models. AMG133 also displayed efficacy and tolerability in the Phase I clinical trial.

11:30 am

Enhancing the Anti-Tumor Efficacy of Bispecific T Cell Engagers via Cell Surface Glycocalyx Editing

Peng Wu, Professor, Chemical Physiology, Scripps Research Institute

Bispecific T cell engager (BiTE)-based cancer immunotherapies that activate the cytotoxic T cells of a patient’s own immune system have gained momentum with the recent FDA approval of Blinatumomab for treating B cell malignancies. However, this approach has had limited success in targeting solid tumors. We have developed of BiTE-sialidase fusion proteins that enhance tumor cell susceptibility to BiTE-mediated cytolysis by T cells via selective desialylation at the T cell-tumor cell interface that results in better immunological synapse formation. We demonstrated that BiTE-sialidase fusion proteins exhibit remarkably increased efficacy as compared to BiTEs alone both in vitro and in an in vivo xenograft solid tumor model. We believe that BiTE-sialidase fusion proteins have great potential as candidates for the development of next-generation bispecific T cell engaging molecules for cancer immunotherapy.

Enjoy Lunch on Your Own12:00 pm

Ice Cream Break in the Exhibit Hall and Last Chance for Poster Viewing (Indigo Ballroom)1:10 pm

DESIGNING MULTI-SPECIFICS FOR FUNCTION

2:00 pm

Chairperson’s Opening Remarks

Pawel Stocki, PhD, Vice President, Research, Ossianix, Inc.

2:05 pm

Engineering CD28 Bispecific Antibodies and Cytokine Mimetics to Treat Solid Tumors

Gregory L. Moore, PhD, Senior Director, Protein Engineering, Xencor, Inc.

T cells require multiple signals (TCR engagement, costimulation, cytokines) for optimal activation, survival, and differentiation. However, T cells and positive signals are found sparingly in solid tumors. Traditional bispecific T cell engagers provide only TCR engagement (CD3) and may drive an incomplete anti-tumor response. We engineered CD28 bispecific antibodies and cytokine mimetics capable of providing T cells with additional signals and show that they provide enhanced activity over traditional bispecifics.

2:35 pm

From Dual Targeting Fabs to Tri- and Tetravalent IgGs

Janina Speck, PhD, Science and People Lead, LMR Discovery, Roche, Germany

The DutaFab platform delivers fully human bispecific Fab molecules, which are structurally indistinguishable from a conventional monospecific Fab and can be reformatted into diverse antibody formats as required. Heavy and light chains both contribute to each of the two adjacent paratopes, which can be maturated independently to high affinities and combined in a modular way. Unique MoAs are achievable by either simultaneous or mutual exclusive binding to the two targets.

Networking Refreshment Break (Aqua Foyer)3:05 pm

ENGINEERING FOR TUMOR, TISSUE, AND ORGAN SPECIFICITY

3:30 pm

Guided Antibody Tumor Engagers (TwoGATE): A Sophisticated and Differentiated Approach for T Cell Redirection in Solid Tumors

Kenneth J. Simon, PhD, Senior Director, Biology, Revitope Oncology

Harnessing the immune system has revolutionized cancer treatment. However, on-target off-tumor toxicities limit their therapeutic potential. Revitope is developing a new class of cancer therapeutics engineered with a split anti-CD3 paratope that enables targeting each inactive half-paratope to a different antigen on the same tumor cell. TwoGATE have pM potency in vitro, potently regress tumors in vivo, are well-tolerated in non-human primates, and have highly favorable developability properties.

4:00 pm

Targeting KRas G12C Covalent Inhibitors in MHC I Complexes for Immunotherapy

Peter Rohweder, PhD, Researcher, University of California, San Francisco

Immunotherapies directed at MHC-I complexes have enabled the direct targeting of intracellular oncoproteins at the cell surface. We asked whether covalent drugs that alkylate mutant oncoproteins could act as haptens to generate MHC-I-restricted neoantigens. Here we report that KRAS G12C mutant cells treated with the covalent inhibitor ARS1620 present ARS1620-modified peptides in MHC-I complexes. Using ARS1620-specific antibodies, we show that these haptenated MHC-I complexes can serve as tumor-specific neoantigens and that a bispecific T cell engager construct based on a hapten-specific antibody elicits a cytotoxic T cell response against KRAS G12C cells, including those resistant to direct KRAS G12C inhibition.

4:30 pm

Development of Brain Delivery Shuttles Based on TfR1 Specific VNAR Antibodies – Translation to Primates

Pawel Stocki, PhD, Vice President, Research, Ossianix, Inc.

Poor brain delivery is a major hurdle in the development of biological therapeutics for neurologic diseases because of poor Blood-Brain Barrier (BBB) penetration. Numerous BBB shuttles based on single domain VNAR antibodies were developed by Ossianix. These include TXP1 which was demonstrated to penetrate the brain with high efficiency when inject at a low therapeutic dose in non-human primates with an over 30-fold increase in comparison to the control.

Close of Day5:00 pm

Friday, January 20

Registration (Indigo Foyer)7:30 am

ROOM LOCATION: Indigo and Aqua Foyer

BuzZ Sessions

8:00 amBuzZ Sessions with Continental Breakfast (IN-PERSON ONLY)

PepTalk’s BuzZ Sessions are focused, stimulating discussions in which delegates discuss important and interesting topics related to upstream protein expression and production through downstream scale-up and manufacturing. This is a moderated discussion with brainstorming and interactive problem-solving between scientists from diverse areas who share a common interest in the discussion topic.
Please continue to check the BuzZ Session page on our conference website for detailed discussion topics and moderators

BuzZ Table 4:

VHH: Challenges & Opportunities

Andre Teixeira, PhD, Head, Antibody Libraries, Specifica

  • Main challenges during VHH development
  • Are they easier to develop than regular antibodies?
  • Where and when should we use them
  • Can they ever replace IgG?​

ROOM LOCATION: Aqua Salon C

NOVEL SCAFFOLDS

9:00 am

Chairperson’s Remarks

Elissa Leonard, PhD, Postdoctoral Fellow, Biomedical Engineering, Johns Hopkins University

9:05 am

Drug-Like VHH Straight from Naive Library Selections

Andre Teixeira, PhD, Head, Antibody Libraries, Specifica

Developing VHH for medical use involves many engineering steps after camelid immunization to humanize, affinity mature, remove liabilities, and engineer Protein A binding. Improving one characteristic often impairs another. We devised a new library that enables bypassing many of these processes: human liability-free CDR1-2 are inserted into clinical VHH scaffolds (humanized) and filtered for Protein A binding. These are combined with >108 CDR3 and are able to yield VHH with drug-like characteristics.

9:35 am

Antibody Invertase Fusion Protein Enables Quantitative Detection of SARS-CoV-2 Antibodies Using Widely Available Glucometers

Elissa Leonard, PhD, Postdoctoral Fellow, Biomedical Engineering, Johns Hopkins University

Rapid, cost-effective, and widely available diagnostics are needed to monitor and mitigate the spread of SARS-CoV-2 and future outbreaks. An engineered antibody-enzyme fusion protein recognizes SARS-CoV-2-specific patient antibodies and catalyzes the conversion of sucrose to glucose, allowing quantification of antibodies against disease antigens using commercial glucometers. Engineering of the detection antibody, as well as a substation of the capture antigen, are expanding the applications and efficacy of this diagnostic.

10:05 am

Computational Peptide Design for Diverse Structures and Functions

Gaurav Bhardwaj, PhD, Assistant Professor, Medicinal Chemistry, University of Washington

Developing peptide binders against intracellular proteins and protein-protein interfaces remains a challenge with current methods and scaffolds. We recently developed computational methods to design peptides with enhanced membrane permeability and oral bioavailability. We are further integrating our computational methods with high-throughput peptide synthesis to design peptide binders for antibiotic, antiviral, and other therapeutic applications. Overall, these methods present avenues for binding intracellular targets currently considered "undruggable" or "difficult to drug."

Networking Coffee Break (Aqua Foyer)10:35 am

11:00 am

Affibody-mediated Targeting of HER3 and EGFR for Cancer Therapy

Stefan Ståhl, PhD, Professor, Molecular Biotechnology, KTH Royal Institute of Technology, Sweden

We evaluated affibody-based concepts for bivalent and bispecific targeting of HER3 and EGFR. For HER3 in mice, we demonstrated efficient tumor growth inhibition. For EGFR, we developed an affibody-based prodrug concept with conditional targeting conferred by an anti-idiotypic affibody masking domain, and activation by cancer-associated proteases, to achieve impressive selective tumor-targeting in tumor-bearing mice. Will be further present how cytotoxic compounds conjugated to the affibody constructs improve their therapeutic efficacy.

11:30 am PANEL DISCUSSION: Development Challenges for Novel Biotherapeutic Scaffolds

Development Challenges for Novel Biotherapeutic Scaffolds

PANEL MODERATOR:

Elissa Leonard, PhD, Postdoctoral Fellow, Biomedical Engineering, Johns Hopkins University

  • Developability ​
  • Design and development strategies
  • Regulatory and IP issues
  • Translation to the clinic
PANELISTS:

Gaurav Bhardwaj, PhD, Assistant Professor, Medicinal Chemistry, University of Washington

Stefan Ståhl, PhD, Professor, Molecular Biotechnology, KTH Royal Institute of Technology, Sweden

Andre Teixeira, PhD, Head, Antibody Libraries, Specifica

Close of Creative Protein Engineering12:00 pm